Home

USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
Search by   *
 
 
 
 
 
 
Maps   
 
 


     Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'USC-OGP 2-DE database' for entry matching: Q8WUM4




USC-OGP 2-DE database:  Q8WUM4


Q8WUM4


General information about the entry
View entry in simple text format
Entry namePDC6I_HUMAN
Primary accession numberQ8WUM4
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Programmed cell death 6-interacting protein; Short=PDCD6-interacting protein; AltName: Full=ALG-2-interacting protein 1; AltName: Full=ALG-2-interacting protein X; AltName: Full=Hp95;.
Gene nameName=PDCD6IP
Synonyms=AIP1, ALIX, KIAA1375
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=6.36; Mw=111581

Cross-references
UniProtKB/Swiss-ProtQ8WUM4; PDC6I_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry namePDC6I_HUMAN
Primary accession numberQ8WUM4
Secondary accession number(s) C5MQH7 E9PFU1 Q6NUS1 Q9BX86 Q9NUN0 Q9P2H2 Q9UKL5
Sequence was last modified on March 1, 2002 (version 1)
Annotations were last modified on March 15, 2017 (version 160)
Name and origin of the protein
DescriptionRecName: Full=Programmed cell death 6-interacting protein; Short=PDCD6-interacting protein; AltName: Full=ALG-2-interacting protein 1; AltName: Full=ALG-2-interacting protein X; AltName: Full=Hp95;
Gene nameName=PDCD6IP
Synonyms=AIP1, ALIX, KIAA1375
Encoded onName=PDCD6IP; Synonyms=AIP1, ALIX, KIAA1375
Keywords3D-structure; Acetylation; Alternative splicing; Apoptosis; Cell cycle; Cell division; Cell junction; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Host-virus interaction; Methylation; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Secreted; Tight junction; Transport.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF349951; AAK20398.1; -; mRNA
EMBLGQ131806; ACS12984.1; -; mRNA
EMBLAF151793; AAF08220.1; -; mRNA
EMBLBT007367; AAP36031.1; -; mRNA
EMBLAC112220; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLAC123901; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLBC020066; AAH20066.1; -; mRNA
EMBLBC068454; AAH68454.1; -; mRNA
EMBLAK002122; BAA92092.1; ALT_INIT; mRNA
EMBLAB037796; BAA92613.1; -; mRNA
CCDSCCDS2660.1; -. [Q8WUM4-1]; .
CCDSCCDS54561.1; -. [Q8WUM4-2]; .
RefSeqNP_001155901.1; NM_001162429.2. [Q8WUM4-2]; .
RefSeqNP_001243121.1; NM_001256192.1. [Q8WUM4-3]; .
RefSeqNP_037506.2; NM_013374.5. [Q8WUM4-1]; .
UniGeneHs.475896; -; .
PDB2OEV; X-ray; 3.30 A; A=1-698
PDB2OEW; X-ray; 2.55 A; A=1-359
PDB2OEX; X-ray; 2.58 A; A/B=360-702
PDB2OJQ; X-ray; 2.87 A; A=360-702
PDB2R02; X-ray; 2.60 A; A=2-698
PDB2R03; X-ray; 2.59 A; A=2-698
PDB2R05; X-ray; 2.55 A; A=2-698
PDB2XS1; X-ray; 2.30 A; A=1-698
PDB2XS8; X-ray; 2.50 A; A=1-698
PDB2ZNE; X-ray; 2.20 A; C/D=799-812
PDB3C3O; X-ray; 2.15 A; A=1-359
PDB3C3Q; X-ray; 2.10 A; A=1-359
PDB3C3R; X-ray; 2.02 A; A=1-359
PDB3E1R; X-ray; 2.00 A; C=797-809
PDB3WUV; X-ray; 2.79 A; C/F/I/L/O/R=796-810
PDB4JJY; X-ray; 6.50 A; A/B=355-708
PDBsum2OEV; -; .
PDBsum2OEW; -; .
PDBsum2OEX; -; .
PDBsum2OJQ; -; .
PDBsum2R02; -; .
PDBsum2R03; -; .
PDBsum2R05; -; .
PDBsum2XS1; -; .
PDBsum2XS8; -; .
PDBsum2ZNE; -; .
PDBsum3C3O; -; .
PDBsum3C3Q; -; .
PDBsum3C3R; -; .
PDBsum3E1R; -; .
PDBsum3WUV; -; .
PDBsum4JJY; -; .
ProteinModelPortalQ8WUM4; -; .
SMRQ8WUM4; -; .
BioGrid115332; 111; .
DIPDIP-29327N; -; .
IntActQ8WUM4; 55; .
MINTMINT-4999333; -; .
STRING9606.ENSP00000411825; -; .
iPTMnetQ8WUM4; -; .
PhosphoSitePlusQ8WUM4; -; .
SwissPalmQ8WUM4; -; .
BioMutaPDCD6IP; -; .
DMDM31076831; -; .
UCD-2DPAGEQ8WUM4; -; .
EPDQ8WUM4; -; .
MaxQBQ8WUM4; -; .
PaxDbQ8WUM4; -; .
PeptideAtlasQ8WUM4; -; .
PRIDEQ8WUM4; -; .
DNASU10015; -; .
EnsemblENST00000307296; ENSP00000307387; ENSG00000170248. [Q8WUM4-1]; .
EnsemblENST00000457054; ENSP00000411825; ENSG00000170248. [Q8WUM4-2]; .
GeneID10015; -; .
KEGGhsa:10015; -; .
UCSCuc003cfx.5; human. [Q8WUM4-1]; .
CTD10015; -; .
DisGeNET10015; -; .
GeneCardsPDCD6IP; -; .
H-InvDBHIX0163463; -; .
HGNCHGNC:8766; PDCD6IP; .
HPACAB016212; -; .
HPAHPA011905; -; .
MIM608074; gene; .
neXtProtNX_Q8WUM4; -; .
OpenTargetsENSG00000170248; -; .
PharmGKBPA33116; -; .
eggNOGKOG2220; Eukaryota; .
eggNOGENOG410XQX6; LUCA; .
GeneTreeENSGT00780000121909; -; .
HOGENOMHOG000006938; -; .
HOVERGENHBG053533; -; .
InParanoidQ8WUM4; -; .
KOK12200; -; .
OMAQVKECYQ; -; .
OrthoDBEOG091G04NC; -; .
PhylomeDBQ8WUM4; -; .
TreeFamTF323502; -; .
ReactomeR-HSA-162588; Budding and maturation of HIV virion; .
ReactomeR-HSA-5210891; Uptake and function of anthrax toxins; .
ChiTaRSPDCD6IP; human; .
EvolutionaryTraceQ8WUM4; -; .
GeneWikiPDCD6IP; -; .
GenomeRNAi10015; -; .
PROPR:Q8WUM4; -; .
ProteomesUP000005640; Chromosome 3; .
BgeeENSG00000170248; -; .
CleanExHS_PDCD6IP; -; .
ExpressionAtlasQ8WUM4; baseline and differential; .
GenevisibleQ8WUM4; HS; .
GOGO:0042641; C:actomyosin; ISS:UniProtKB; .
GOGO:0005829; C:cytosol; IDA:HPA; .
GOGO:0070971; C:endoplasmic reticulum exit site; IMP:UniProtKB; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:1903561; C:extracellular vesicle; IDA:UniProtKB; .
GOGO:0005925; C:focal adhesion; IDA:UniProtKB; .
GOGO:0001772; C:immunological synapse; IDA:BHF-UCL; .
GOGO:0042470; C:melanosome; IEA:UniProtKB-SubCell; .
GOGO:0016020; C:membrane; IDA:UniProtKB; .
GOGO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell; .
GOGO:0043209; C:myelin sheath; IEA:Ensembl; .
GOGO:0048306; F:calcium-dependent protein binding; IPI:UniProtKB; .
GOGO:0042803; F:protein homodimerization activity; IPI:UniProtKB; .
GOGO:0031871; F:proteinase activated receptor binding; IPI:UniProtKB; .
GOGO:0000915; P:actomyosin contractile ring assembly; ISS:UniProtKB; .
GOGO:0006915; P:apoptotic process; IEA:UniProtKB-KW; .
GOGO:0070830; P:bicellular tight junction assembly; ISS:UniProtKB; .
GOGO:0000920; P:cell separation after cytokinesis; IMP:UniProtKB; .
GOGO:0045199; P:maintenance of epithelial cell apical/basal polarity; ISS:UniProtKB; .
GOGO:0036258; P:multivesicular body assembly; NAS:ParkinsonsUK-UCL; .
GOGO:1903543; P:positive regulation of exosomal secretion; IMP:UniProtKB; .
GOGO:1903553; P:positive regulation of extracellular exosome assembly; IMP:UniProtKB; .
GOGO:0015031; P:protein transport; IEA:UniProtKB-KW; .
GOGO:0010824; P:regulation of centrosome duplication; IMP:UniProtKB; .
GOGO:1903551; P:regulation of extracellular exosome assembly; IMP:UniProtKB; .
GOGO:0090559; P:regulation of membrane permeability; ISS:UniProtKB; .
GOGO:0090611; P:ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway; IMP:UniProtKB; .
GOGO:0039702; P:viral budding via host ESCRT complex; IGI:UniProtKB; .
GOGO:0019058; P:viral life cycle; TAS:Reactome; .
Gene3D1.25.40.280; -; 1; .
InterProIPR025304; ALIX_V_dom; .
InterProIPR004328; BRO1_dom; .
PfamPF13949; ALIX_LYPXL_bnd; 1; .
PfamPF03097; BRO1; 1; .
SMARTSM01041; BRO1; 1; .
PROSITEPS51180; BRO1; 1; .



USC-OGP 2-DE database image


Gateways to other related servers


Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

[Home]